BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB026E04SP1|AL428558
(710 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig708 1195 0.0
>3x_Contig708
Length = 1983
Score = 1195 bits (590), Expect = 0.0
Identities = 673/710 (94%), Gaps = 3/710 (0%)
Strand = Plus / Minus
Query: 1 ttattcattactacaggcaccatgactgcaaacactgatactagacatctatggaatctg 60
|||||||||||||||| |||||| ||||||| ||||||||||||||||||||||||||||
Sbjct: 1877 ttattcattactacag-caccattactgcaa-cactgatactagacatctatggaatctg 1820
Query: 61 acttctcatatctatagattccaaggtgcgatattccctattgaattgttcgacattgtt 120
|| |||||||||||||||||| |||||||||||||||||||||||||||||||||| |
Sbjct: 1819 cct-ctcatatctatagattcccaggtgcgatattccctattgaattgttcgacattttg 1761
Query: 121 cattccgtgaatgaacactcaccagttgctaatgtcctacaacttgcaggctttatctac 180
|||||| |||| || ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1760 cattccttgaaataagactcaccagttgctaatgtcctacaacttgcaggctttatctac 1701
Query: 181 cagtatgtactaaatgctgatggtgctgatgttggtttctaataactgtagaaattaaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1700 cagtatgtactaaatgctgatggtgctgatgttggtttctaataactgtagaaattaaat 1641
Query: 241 aacaaacaatataaacatgaactaactatccttagaatatgtaaaaccgtaatawtcaaa 300
|||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||
Sbjct: 1640 aacaaacaatataaacatgaactaactatccttagaatatgttaaaccgtaatattcaaa 1581
Query: 301 awwrtagttatcctatgcagaactgtcgctctggtggattggttactgtmtggwctccat 360
| ||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||
Sbjct: 1580 attgtagttatcctatgcagaactgtcgctctggtggattggttactgtctggtctccat 1521
Query: 361 tctatatctgtcgtatathcgggtaacattgttgtccgggtgacattathhmchtgtttg 420
|||||||||||||||||| |||||||||||||||||||||||||||||| | ||||||
Sbjct: 1520 tctatatctgtcgtatattcgggtaacattgttgtccgggtgacattattttcttgtttg 1461
Query: 421 aatttmmacttttcaacaatcaaacaaaacctgtcaaagcatagagaatatragcktgga 480
| ||| |||||||||||||||||||||||||||||||||||||||||||| ||| ||||
Sbjct: 1460 attttttacttttcaacaatcaaacaaaacctgtcaaagcatagagaatataagcttgga 1401
Query: 481 agagtagaactacctgtgaaatacagcctagatagagggggtaacctttgtdttcctgtt 540
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 1400 agagtagaactacctgtgaaatacagcctagatagagggggtaacctttgttttcctgtt 1341
Query: 541 gtatcagagggcagaacttctgggtgggagawaaatttatararaatgtmaaggcaggag 600
||||||||||||||||||||||||||||||| ||||||||| | ||||| ||||||||||
Sbjct: 1340 gtatcagagggcagaacttctgggtgggagataaatttatagagaatgtcaaggcaggag 1281
Query: 601 cttatcgcaaaaatwcgtwatgaaaacgagctaccagctccgcttttaccaccgaagtta 660
|||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 1280 cttatcgcaaaaattcgttatgaaaacgagctaccagctccgcttttaccaccgaagtta 1221
Query: 661 atcaaataccaagcttcgcctgatgaagacgtaagtwccagcaaactttt 710
|||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 1220 atcaaataccaagcttcgcctgatgaagacgtaagttccagcaaactttt 1171
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.40 0.715 1.33
Gapped
Lambda K H
1.40 0.715 1.33
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3527
Number of Sequences: 1807
Number of extensions: 3527
Number of successful extensions: 83
Number of sequences better than 1.0e-20: 1
length of query: 710
length of database: 10,358,551
effective HSP length: 16
effective length of query: 694
effective length of database: 10,329,639
effective search space: 7168769466
effective search space used: 7168769466
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.4 bits)
S1: 12 (24.8 bits)
S2: 49 (99.7 bits)